Where to Stay in Galapagos Islands for an Epic Trip • 4 Islands (+Hotels)

0 Where to Stay Galapagos Islands

Planning a trip to the Galapagos Islands? Wow, you’re super lucky because this destination is so unique that it will be so hard to leave it! I’m sure you’ve heard about the diverse plant and animal life that you can find on the “Enchanted Islas.”

Almost 97% of the Galapagos Islands is a national park, and there are over 400 species of fish, different types of birds, iguanas, and other native and endemic Galapagos wildlife. No wonder Charles Darwin came up with his theory of evolution by natural selection after visiting the archipelago!

There are rumors that you can only visit the Galapagos islands if you go on a tour/with a cruise, but luckily that’s not true, and I am here to show you the best places where to stay Galapagos Islands and give you all the other details that you should know if you’re planning to travel to the archipelago by yourself! But if you prefer someone else to organize everything for you, I will also recommend some great tours at the end of the post.

Keep in mind that you have to book super in advance for this location! Also, you will have to show copies of your return flights and cruise/hotel reservation to be allowed onto the archipelago, and since so many people want to come here on holiday yet there aren’t so many places, it might be difficult to match up all those dates if you book last minute!

Let’s go, the iguanas are waiting!

If you are in a hurry

If you want to book now, there’s no reason to wait any longer! Browse this list with the best hotels in the Galapagos Islands, all located in Santa Cruz, the most popular island:

luxury hotel
0 1 Finch Bay Galapagos 5 star hotel
mid-range hotel
0 3 Semilla Verde affordable Boutique Hotel
budget hotel
0 4 Patty Hospedajel Cheap stay

Patty Hospedajel

Best affordable accommodation in the center

0 2 Encantadas Sea Airbnb

Encantadas Sea

An Airbnb with amazing reviews

Here’s a map that will help you visualize all the areas where to stay in Galapagos Islands that I will be talking about in this post:

Map of best places to stay in Galapagos Islands
Santa Cruz
for first-timers
San Cristobal
for budget
Puerto Villamil, Isabela
for nature lovers
Floreana Island
for adventure

Things to Know About the Galapagos Islands

1 Things to Know About the Galapagos Islands

As I mentioned, visiting the Galapagos Islands isn’t your average vacation. If you are planning a trip, you need to understand some very important details before making any decisions…

  1. There are no boats from mainland Ecuador to Galapagos, you must fly to reach the islands (there are no international flights, you will definitely have a connection in Quito or Guayaquil
  2. There are 4 inhabited islands, the main three each have their own airport:
    • Santa Cruz Island with its main town called Puerto Ayora (Seymour Airport)
    • San Cristobal – also have many day tours so it is worth staying there (San Cristobal Airport)
    • Isabela Island – it is the biggest island of them all, but only ~3000 people live there, all of them in Puerto Villamil. If you have some time you should DEFINITELY visit, they have an abundance of wildlife there, including penguins (General Villamil Airport, but it is for small inter-island flights only)
    • Floreana – that’s where you should see some super rich underwater life. There are almost no hotels there, most people go as a day tour/cruise, but it is possible to stay overnight if you book ahead (check my Bonus section)
  1. You will need to buy an INGALA Transit card (US$20) AND pay the Galapagos National Park Entrance fee (US$100) at the airport in cash. Don’t lose the receipt of your transit card, as you must return it when leaving the Galapagos.
  2. You must also show proof of a return flight, cruise booking, and/or hotel booking, so make sure you have everything organized in advance and print your confirmations.
  3. Bring cash (USD is the official currency in Ecuador) – there is an ATM at the airport, but I would not really rely on it. You will be able to pay by card in most restaurants and tourist shops, but they will all charge you a 3% fee on top of that. So, cash is still king there.
  4. There are only public ferries between Isabela <> Santa Cruz <> San Cristobal, the prices are around USD$30 for adults and USD$17 for children (2 to 10 years old). You do not need a cruise/tour to get to the island, but if you want to visit the main attractions, you will still need to take a guided tour (it is a protected area).
  5. Internet access can be limited, so make sure you won’t have to rely on it if you need to work during your trip. There is decent Internet in Puerto Ayora and San Cristobal center of town, but that’s pretty much it.

1. Santa Cruz – where to stay in Galapagos Islands for the first time

1 Where to stay near Santa Cruz

All the Galapagos Islands are a dream destination for many travelers! Out of the 4 inhabited islands, Santa Cruz island (or its town called Puerto Ayora to be precise) is the most popular one for tourism.

If you just base yourself in Santa Cruz, I am sure you would have the stuff to do for at least a week! The island itself has a lot to offer, but there are also a lot of day trips you can take from there. So buckle up and enjoy your days of swimming, snorkeling, and scuba diving!

To get here you will fly into Seymour Airport which is located on its own tiny island attached to Santa Cruz. There is a bus from the airport to the ferry, then a ferry to Santa Cruz (literally a 3 min ride), and then about an hour ride by car/bus to Puerto Ayora – the town with all the infrastructure. Leave about 1,5 hours for transportation and about (it is 11 USD per person if you go by bus or 25 USD for the taxi of up to 4 people + 6 USD per person to get to the taxi).

Puerto Ayora is the island’s main town, and this is where you’ll find all the shops, restaurants, and hotels. Many people choose this island as their first destination in the Galapagos as you can take ferries to visit the other 3 islands in the archipelago as well as visiting the attractions in Santa Cruz such as the Charles Darwin Research Station, where you can learn all sorts of things about the animals on the island and explore the Fish Market!

Since it’s the most popular starting place and most of the accommodation options are well .. simple, you will for sure have to book everything months in advance to secure a spot!

Luxury hotel
Best luxury hotel Galapagos Hotel

This 5 star stunning hotel is located in Finch Bay, only a short walk away from the beach. Chill by the pool or relax in the hot tub after having a delicious dinner at the restaurants. The accommodation also offers different activities like cooking classes so you will always have something fun to do here!

Other accommodation options in Santa Cruz

1 2 Semilla Verde Boutique Hotel

Chill in the hammocks and watch the giant tortoises at this boutique hotel that has a swimming pool and offers breakfast

1 3 Patty Hospedajel with the pool 

A nice budget place that has a great location, a swimming pool, and family rooms with air- conditioning

1 4 Encantadas Sea with Free cancellation

Enjoy your stay in the Galapagos Islands in this spacious place that has air-conditioning and free wifi

Things to do in Santa Cruz

  • Learn about the wildlife of the Galapagos Islands at the Charles Darwin Research Station
  • Rent a kayak in Tortuga Bay and see turtles and rays
  • Dive with hummerheadsharks (if you are lucky!), I went with these guys and was more than happy
  • Take a day tour to Pinzon Island and Palmitas Bay
  • Explore the uninhabited island of North Seymour on a day tour
  • Go for a swim at El Garrapatero beach
  • Take a day trip to check out the beaches on Bartolome Island 
  • Spot some really old tortoises at Rancho Primicias Giant Tortoise Reserve
  • Take adorable pictures of sea lions at the fish market in Puerto Ayora
  • Refresh in Las Grietas

2. San Cristobal – where to stay in the Galapagos Islands on a budget

2 Hotels with Panoramic Sea views in San Cristobal

Lying 60 miles (100 km, ~2 hours by boat) east of Puerto Ayora (Santa Cruz Island), San Cristóbal Island is the second island travelers choose to fly into after Santa Cruz as it has the San Cristobal Airport which receives flights from both Quito and Guayaquil, Ecuador.

San Cristobal is also home to Puerto Baquerizo Moreno, the administrative center of the Galapagos Islands, and the location where you’ll find a lot of restaurants and pubs. This island might be a good place to look for places to stay for people traveling on a budget as it’s fairly cheaper than the first one.

Although most people come to the Galapagos Islands to spend time in nature and enjoy the wildlife, I know some of you will still want to party and see the islands at night. You can do this in San Cristóbal as there are a few bars and clubs where you can grab a drink and dance.

Of course, the island is filled with panoramic spots that you should visit during your time here. Mother Nature sure knows how to surprise us! Probably one of the most beautiful places on San Cristóbal Island is El Junco Lagoon, but hey, that’s just my opinion. I’m sure you’ll find many more spots, as incredible as this one!

Luxury hotel
2 1 Galápagos Casa Playa Mann

Get cozy in one of those hammocks and enjoy the sea views from the terrace of this luxury location in the Galapagos Islands within walking distance from the beach. The hotel has a garden and rooms equipped with air-conditioning and a flat-screen tv.

Other accommodation options in San Cristobal

2 2 Eco Hotel Katarma

Enjoy the sun by the swimming pool of this boutique hotel that has a restaurant and a bar

2 3 Hostal Romy with the view 

Offering spacious rooms and sea views, this budget hotel has many facilities, including a free airport shuttle

2 4 Modern Apartment

Relax after a whole night spent in the town on the balcony of this apartment that has space for 4 guests

Things to do in San Cristobal

  • Admire the scenic views at Cerro Brujo island mountain
  • Learn the history in San Cristobal Interpretation Center
  • Do a hike to Cerro Tijeretas
  • See all different types of animals during a day tour to Lobos Island
  • Hike, snorkel, and explore Espanola Island during a day tour from San Cristobal
  • Explore El Junco Lagoon, one of the most beautiful places on the island
  • Relax and spot some cute sea lions at Point Carola Beach
  • Go on a snorkel trip to Kicker Rock Island 
  • Party at night at Neptunus Club in San Cristobal
  • Explore the Galapaguera de Cerro Colorado nature reserve and Puerto Baquerizo Moreno

3. Puerto Villamil (Isabela Island) – for nature lovers

3 Best places to stay in Puerto Villamil

Located on Isabela Island 45 miles (75 km) west of Santa Cruz island, Puerto Villamil has a wide range of places to stay and it’s a great spot for people traveling with their families. To get to the island you will first need to fly into one of the main islands above and then you can take a local flight to General Villamil Airport or a boat (but I have to warn you, it will be a bumpy ride).

Out of all the inhabited islands, Isabela Island has the smallest number of people living here. All 3000 of them are based in Puerto Villamil and that is where all the tours start from as well

There are tons of activities and beautiful places to explore on Isabela for both adults and children. The Arnaldo Tupiza-Chamaidan Giant Tortoise Breeding Center is a great spot to learn about wildlife and spot some really cute tortoises!

And if you guys are into hiking and spending time in nature, you can hike to see the Sierra Negra Volcano! Check out the Los Tuneles tour – you might spot dolphins (we did!) and penguins (we did!) and definitely many sea lions and sea turtles. Oh, and blue-footed boobies too! 🙂

Don’t forget you’re on a stunning island surrounded by nature and beaches, so head over to Isabela beach to sunbathe, swim in the ocean, and relax all day long!

Luxury hotel
3 1 Isamar Hotel

This accommodation has such a great location! Walk from the sun terrace right on the beach at this luxury hotel on Isabela Island with a restaurant and a garden. The family rooms are equipped with air-conditioning and a flat-screen tv. You can have breakfast and also join yoga or fitness classes at Ismar hotel!  

Other accommodation options in Puerto Villamil

3 2 The Isabela Beach House

Enjoy the ocean views from the private beach of this hotel that offers breakfast and has family rooms and a garden

3 3 Hotel La Jungla cheap deals

A nice beachfront hotel with family rooms where guests have access to a shared lounge and a garden

3 4 Flip Flop House

This spacious house has 2 rooms, perfect for family guests, a kitchen, and free wifi

Things to do in Puerto Villamil 

  • Snorkel with penguins (maybe) and sea lions (definitely) in Concha Perla
  • Spot blue footed boobies during Los Tuneles day tour
  • Go on a walking tour to Sierra Negra Volcano
  • Spend a fun day at the Arnaldo Tupiza-Chamaidan Giant Tortoise Breeding Center
  • Enjoy a beautiful sunset from one of the beach bars
  • Take a day trip to Tintoreras Bay from Isabela Island
  • Visit the Wall of Tears
  • Go hiking around Sierra Negra Volcano (take water and strong sunscreen!)

4. Floreana Island – for adventure seekers

4 Best Unique places in Galapagos

Floreana Island is one of the least populated out of the main 4 Galapagos Islands inhabited, so naturally, you won’t find many hotels or restaurants in this location, but it’s still worth a visit! Like her other island sisters, Floreana Island is filled with beautiful wildlife, unique natural spots, and different animals!

The best way to see the island is to go on a full-day tour from Puerto Ayora, located 60 miles (100 km) north of Floreana Island. On the tour, you will go snorkeling at Black Beach and see penguins, sea turtles, flamingos, and iguanas in their natural habitat while exploring some of the biggest attractions on Floreana Island such as Scalecias Forest and Asilo de la Paz.

If you prefer to experience the tranquility of the island for a little longer, you can also take the ferry from Puerto Ayora and stay in one of the two hotels here. Now, as far as I know, the ferries from Santa Cruz to Floreana are not regular and don’t have an exact schedule. You will need to ask in Puerto Ayora, you might need to organize your own private boat for that.

If you decide to stay overnight, here are your two hotel options on Floreana Island:

  • Black Beach House – Wake up to the sound of the waves crashing on the sand in this spacious house with free wifi and a kitchen! You can chill in the garden during the day or at night before going to bed, spend a little time enjoying the silence in the hammock!
  • Floreana Lava Lodge – This eco-friendly lodge has 10 different cabins that you can rent for your stay on Floreana Island. The accommodation offers breakfast and different land-based programs that you can join.
👑 Luxury price:$250
💵 Mid Range:$100
🛏️ Budget:$60
🏠 Airbnb:$100
💰Accommodation prices:Low
📍Best area:Santa Cruz 
👪 Best area for families:Puerto Villamil
🛎️ Best luxury hotel:Finch Bay Galapagos Hotel
💵 Best mid-range hotel:Semilla Verde Boutique Hotel
👛 Best budget hotel:Patty Hospedajel

BONUS: The best cruises around the Galapagos Islands

5 Best Award Winning Hotels on the Galapagos Islands

Planning a visit to the Galapagos Islands can be difficult at times, as there are a few quirks and things that you need to figure out on your own, and if you’re not a fan of organizing holidays, then I recommend booking a cruise or a land tour. That way, you won’t have to worry about finding hotels in Galapagos Islands or about any other details!

So let’s see which are the best tour cruises that you can book!

1. Galapagos Land and Sea Adventure 

  • 10 days 
  • San Cristóbal, Isabela, Santa Cruz
  • Includes flights
  • From $5460 per person 

This is a luxury cruise trip of 10 days that starts with a flight from Quito in Ecuador to the Galapagos Islands. Then you’ll be cruising around the islands doing different activities like snorkeling and hiking, so you’ll be doing a few on-land activities as well. The cruise includes accommodation at the hotels in Galapagos, flights, guides, meals, and transport, among other things. 

2. Galapagos Island Cruise 

  • 5 days
  • Isabela, Santa Cruz, Floreana, Baltra
  • Flights not included
  • $4110 per person

Another luxury cruise that lasts 5 days but doesn’t include the flights from Ecuador, so you’ll have to make your way there. The cruise includes accommodation, meals, exploring the Galapagos Islands, guides, and snorkeling.

best way to see the Galapagos Islands

3. Family Holiday to Galapagos Islands 

  • 8 days
  • San Cristóbal, Santa Cruz
  • Includes flights
  • $2550 per person

You can only book this 8 days cruise to the Galapagos if you have a child with you as it is organized especially for families! The tour provides travelers with a flight from Ecuador, accommodations, meals, and different activities on the Galapagos Islands.   

4. Galapagos Tour

  • 8 days
  • San Cristóbal, Santa Cruz, Isabela, Bartolome
  • Includes flights
  • $1980 per person

Enjoy an 8 days holiday around the Galapagos Islands on this cruise that includes a flight to the islands. You will be spending your trip exploring Santa Cruz, San Cristobal, and Isabela Island. You will be provided with accommodation, meals, transport, and many other things. 

5. Galapagos Experience 

  • 7 days
  • San Cristóbal, Santa Cruz
  • Flights not included
  • $1060 per person

This budget cruise is perfect for anyone looking for a way to save during their trip to the Galapagos Islands. You will have to book your flights from Ecuador, and once you’re there, you will explore 2 of the islands, Santa Cruz and San Cristobal. The cruise also includes accommodation, food, a guide, and other things like snorkeling and visiting attractions. 

Frequently asked questions about Galapagos Islands

6 Where to stay with the family

🏝️ Which island is the best to stay in Galapagos?

Santa Cruz is the best island to stay in the Galapagos Islands, it’s the most popular when it comes to tourism, it has great hotels such as Finch Bay Galapagos Hotel, and you can take a boat trip to other islands from here.

🦎 Where do you stay when visiting the Galapagos Islands?

You can stay on any of the 4 inhabited islands (Santa Cruz, San Cristobal, Puerto Villamil, and Floreana). Still, I recommend staying in Santa Cruz as it has great boat connections to the other islands and awesome hotels, like Finch Bay Galapagos Hotel

📅 How many days do you need in Galapagos?

The vast majority of people spend between 6 to 8 days in the Galapagos Islands, so they can visit most of the attractions and spend enough time exploring the wildlife and the beaches.

🤔 What is the best way to see the Galapagos Islands?

You can visit the Galapagos Islands by yourself or by going on a cruise. You can choose between the 2 depending on whether you would like to have someone organize your trip or if you want to decide where you’ll be staying.

🏨 What type of hotels are there in the Galapagos?

You will find hotels from luxury like Finch Bay Galapagos Hotel to mid-range Semilla Verde Boutique Hotel and budget Patty Hospedajel.

🌧️ What is the worst time to visit the Galapagos?

The worst time to visit Galapagos is during the hot and rainy season from December to May when heavy rains disrupt animal activity and reduce visibility for snorkeling.


7 unparalleled romantic honeymoons in Galapagos

Are you as taken aback by this destination as I am? It really is one of the most special places in the world! I hope this post helped you decide where to stay in the Galapagos Islands and which hotel or cruise to book.

There are a lot of accommodation options in this post, and I know it takes so much time to decide, so here are my top 2 favorite ones, both located in Santa Cruz:

Just remember to book all your hotels and cruises in advance! This place is on the list of every avid traveler in the world!

Enjoy your trip to paradise! Explore every hidden corner, beach, and bay. Observe the unique animal in their natural habitat, take lots of pictures, and party all night in the clubs. You’ll want to remember everything! And don’t forget to leave me a comment below if you have any questions or suggestions for our readers!

Safe Travels,


Disclaimer: Please note that some of the links on this page might be affiliate links, which means that at absolutely no extra cost for you we will earn a small commission for a sale generated through the website. We only recommend the things we actually use ourselves and never accept useless sponsored crap. Thank you so much for supporting this project!


  1. Melissa Sadowsky 30.11.2022 at 06:01
    • Yulia 01.12.2022 at 03:44
  2. Marilyn Kaufman 20.09.2022 at 23:11
    • Yulia 21.09.2022 at 10:57
  3. Dian Chase 18.02.2022 at 14:43
    • Yulia 21.02.2022 at 00:32

Leave a comment

This site uses Akismet to reduce spam. Learn how your comment data is processed.

Follow @misstourist on Instagram!